Tassel cmlm
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Tassel cmlm
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WebAug 28, 2024 · Based on the oleic acid content of 260 soybean lines, TASSEL software (Glm model, mlm model, cmlm model), fastlmmc software, and Emmax software were used for the GWAS. SNP markers significantly correlated with the oleic acid content of soybean seeds were detected, and the linkage disequilibrium (LD) distance was set to 8.9 kb. WebSometimes, the CMLM model is not suite for your data. For instance, ... They were genotyped using 156 snps. I used tassel for running the association analysis. And I need to use FDR to determine ...
WebCombining the annotation of TAIR, candidate genes are shown in Table 3, and the Manhattan plots of cMLM model of TASSEL can be found in supplementary file S1. We … WebJul 13, 2024 · Using compressed mixed linear model (CMLM) by TASSEL, a total of 57,272 markers were used to performed a GWAS to detected significant markers for 15 traits under AP and NP. The Bonferroni-corrected threshold (−log 10 ( p ) ≥ 4.76, α = 1) was applied to identify significant markers.
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WebMay 18, 2024 · Additionally, a total of 71 major and 85 minor candidate genes located in the 200-kb genomic region of each peak SNP detected by CMLM and mrMLM were found, respectively. By using a gene-based association, a total of six SNPs from three major effects genes and eight SNPs from four minor effects genes were identified. equivalent wt of lactic acidWebNov 22, 2024 · First, a traditional molecular principal component analysis (hereinafter referred to as PC) was carried out in TASSEL v.5 (Bradbury et al., 2007). ... Three CMLM models that used the PCA1 as a covariable (HIT CMLM-PC-EMMA, HSI CMLM-PC-EMMA, and PCA1 CMLM-PC-EMMA) captured, at a lax threshold, one additional associated … equivocation ambiguity examplesWebNov 1, 2007 · TASSEL (Trait Analysis by aSSociation, Evolution and Linkage) implements general linear model and mixed linear model approaches for controlling population and … find key map c++Web7110 Tassel Meadow Dr , Indianapolis, IN 46217-7497 is a single-family home listed for rent at /mo. The 1,875 sq. ft. home is a 3 bed, 2.5 bath property. View more property details, … find key of song using notesWebMar 7, 2010 · Mixed linear model (MLM) methods have proven useful in controlling for population structure and relatedness within genome-wide association studies. However, … find key of melodyWebnuLOOM Ansley Moroccan Lattice Tassel Area Rug, 5' 3" x 7' 7", Beige . Visit the nuLOOM Store. 4.6 out of 5 stars 3,466 ratings-36% $119.47 $ 119. 47 ($3.00 $3.00 / Sq Ft) List Price: $188.00 $188.00. The List Price is the suggested retail price of a new product as provided by a manufacturer, supplier, or seller. Except for books, Amazon will ... equiv tests in sasWeb本发明提供一种是基于全基因组关联分析和全基因组选择建立快速筛选玉米优良自交系的分子育种方法。本发明通过3种全基因组关联分析方法即FarmCPU、MLMM和CMLM计算与玉米单穗产量、穗粒数和百粒重关联SNP的显著性。通过比较不同模型预测的准确性，确定最佳的预测模型。利用最佳模型对不同标记 ... equiwatt.ch/kit